target-prioritization
Prioritize drug targets from a ranked gene list (e.g., scRNA-seq DE output) by orchestrating parallel API queries against UniProt, OpenTargets (with integrated DepMap CRISPR essentiality + gnomAD constraint), PubMed, the Human Protein Atlas (HPA), and ChEMBL tool compounds, then re-ranking by a composite score combining protein localization, druggability, disease genetics, tissue specificity (safety), focus-cell-type expression, CRISPR essentiality, LoF safety constraint, and research maturity. Use whenever the user wants to filter, triage, prioritize, or "do due diligence" on a list of candidate genes for drug discovery, especially after a DE / DEG analysis when they say things like "which of these should I follow up on", "filter for druggable targets", "make a target dossier", "rank these for tractability", "annotate these genes for druggability", or "build a target report". Trigger even when the user says just "filter these candidate genes" or hands over a CSV from a DE pipeline.
Esta skill incluye scripts que tu agente puede ejecutar. Ver qué archivos
Resumen
Su SKILL.md se queda en GitHub
Este repositorio no tiene una licencia que le permita a Deska mostrar sus archivos aquí. Lee el SKILL.md en GitHub antes de instalarla.
Archivos 12 archivos
- scripts/aggregate.pyScript
- scripts/build_html_report.pyScript
- scripts/fetch_chembl.pyScript
- scripts/fetch_hpa.pyScript
- scripts/fetch_opentargets.pyScript
- scripts/fetch_pubmed.pyScript
- scripts/fetch_uniprot.pyScript
- scripts/orchestrate.pyScript
- SKILL.mdMarkdown
- prompts/rationale_template.mdMarkdown
- references/api_endpoints.mdMarkdown
- weights.yamlArchivo
Instálala a mano
Deska ejecuta esto por ti, para cada agente que elijas. Para ejecutarlo tú en una terminal:
npx skills add agents365-ai/365-skills --skill target-prioritizationMás de agents365-ai
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